Update default resolution of gsList — updateResolution • geneSetSimplifyR

Sets the resolution used by all plotting and table functions when their resolution argument is NULL. It replaces the optimal resolution found by clusterGeneSets() as the default.

Usage

updateResolution(geneSetsList, resolution)

Arguments

geneSetsList: 'gsList' object that has been clustered and labeled.
resolution: Numeric. The clustering resolution to use as the new default. It must have been used as a resolution in clusterGeneSets().

Value

'gsList' object updated with the new default resolution.

Examples

gsListObject <- updateResolution(exampleGsList, 0.6)
extractResolution(gsListObject)
#> [1] 0.6